Rhizobium ruizarguesonis strain Vaf-46

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium ruizarguesonis strain Vaf-46 is a Gram-negative, rod-shaped bacterium that thrives in soil environments. This strain is classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. It is an aerobic organism, requiring oxygen for its metabolic processes, and is mesophilic, growing optimally within moderate temperature ranges. Mobility is a characteristic feature of R. ruizarguesonis strain Vaf-46, which possesses flagella that facilitate its movement through the soil. This motility may enhance its ability to colonize plant roots and engage in symbiotic relationships. Notably, this strain does not undergo sporulation, which suggests it relies on its ability to adapt to environmental conditions rather than forming dormant spores for survival. The strain has two replicons, indicating the presence of multiple genetic elements, which may contribute to its adaptability and metabolic versatility. Its accessions, CP171851.1 and CP171853.1, provide further genetic information crucial for understanding its biology. In an ecological context, the ability of R. ruizarguesonis strain Vaf-46 to engage in symbiosis with leguminous plants can enhance soil fertility through nitrogen fixation, thus playing a significant role in nutrient cycling within its habitat. This interaction underlines the importance of soil-dwelling bacteria in supporting plant growth and maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium ruizarguesonis
Strainstrain Vaf-46

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium ruizarguesonis strain Vaf-46
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhizobium ruizarguesonis strain Vaf-46 plasmid unnamed5.

Gene Summary

Adenine Count

41265 bp

Thymine Count

41638 bp

Guanine Count

58734 bp

Cytosine Count

58376 bp

Genome Length

200013 bp

Protein-coding Genes

203 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicaseA4U53_008860Not AvailablePositive35788 - 3837496264.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeA4U53_008865Not AvailablePositive38371 - 3988855907.3
nucleotidyltransferase family proteinA4U53_008870Not AvailablePositive39902 - 4063326634.2
dead/deah box helicaseA4U53_008875Not AvailablePositive40637 - 43830116138.0
dead/deah box helicaseA4U53_008880Not AvailablePositive43823 - 47373126469.0
thioredoxinA4U53_008885Not AvailablePositive47449 - 4776911348.7
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseA4U53_008890Not AvailableNegative47842 - 4919448189.1
acetyl-coa carboxylase, carboxyltransferase subunit betaA4U53_008895Not AvailableNegative49222 - 5012733018.3
tryptophan synthase subunit alphaA4U53_008900Not AvailableNegative50269 - 5110829516.9
tryptophan synthase subunit betaA4U53_008905Not AvailableNegative51112 - 5233243691.4

Displaying genes 531 – 540 of 5473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.