Stenotrophomonas rhizophila strain GA1

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas rhizophila strain GA1 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph that thrives in multiple habitats. This strain is anaerobic, meaning it does not require oxygen for growth, and it exhibits mobility due to the presence of flagella. Stenotrophomonas rhizophila strain GA1 falls within the mesophilic temperature range, indicating it optimally grows at moderate temperatures. The strain contains two replicons, which may be indicative of its genetic adaptability and versatility in various environments. Notably, Stenotrophomonas rhizophila strain GA1 is nonsporulating, suggesting it does not form spores as a means of survival under unfavorable conditions. The ecological role of Stenotrophomonas rhizophila strain GA1 can be significant due to its ability to thrive in diverse environments, coupled with its metabolic capabilities. As a chemoheterotroph, it likely plays a role in organic matter decomposition, contributing to nutrient cycling within its ecosystem. Its anaerobic nature suggests potential involvement in anaerobic processes, such as those occurring in wetlands or other low-oxygen environments. Overall, Stenotrophomonas rhizophila strain GA1 exemplifies microbial versatility and adaptability, contributing to the dynamism of microbial communities across different habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas rhizophila
Strainstrain GA1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas rhizophila strain GA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete

Gene Summary

Adenine Count

19247 bp

Thymine Count

19690 bp

Guanine Count

24680 bp

Cytosine Count

24775 bp

Genome Length

88392 bp

Protein-coding Genes

90 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dha2 family efflux mfs transporter permease subunitDZC31_22495Not AvailablePositive4733040 - 473449151067.2
tetr family transcriptional regulatorDZC31_22500Not AvailableNegative4734568 - 473520023778.6
mexa family multidrug efflux rnd transporter periplasmic adaptor subunitDZC31_22505Not AvailablePositive4735453 - 473660741284.2
efflux rnd transporter permease subunitDZC31_22510Not AvailablePositive4736611 - 4739763112780.0
adec/adek/oprm family multidrug efflux complex outer membrane factorDZC31_22515Not AvailablePositive4739760 - 474121452975.1
deor family transcriptional regulatorDZC31_22520Not AvailablePositive4741566 - 474282143963.1
lysr family transcriptional regulatorDZC31_22525Not AvailablePositive4743013 - 474393633688.8
duf962 domain-containing proteinDZC31_22530Not AvailablePositive4744118 - 474463018223.7
4-carboxymuconolactone decarboxylaseDZC31_22535Not AvailableNegative4744627 - 474501914731.6
3-oxoadipate enol-lactonaseDZC31_22540Not AvailableNegative4745030 - 474582128651.2

Displaying genes 4651 – 4660 of 5769 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.