Stenotrophomonas rhizophila strain GA1

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas rhizophila strain GA1 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph that thrives in multiple habitats. This strain is anaerobic, meaning it does not require oxygen for growth, and it exhibits mobility due to the presence of flagella. Stenotrophomonas rhizophila strain GA1 falls within the mesophilic temperature range, indicating it optimally grows at moderate temperatures. The strain contains two replicons, which may be indicative of its genetic adaptability and versatility in various environments. Notably, Stenotrophomonas rhizophila strain GA1 is nonsporulating, suggesting it does not form spores as a means of survival under unfavorable conditions. The ecological role of Stenotrophomonas rhizophila strain GA1 can be significant due to its ability to thrive in diverse environments, coupled with its metabolic capabilities. As a chemoheterotroph, it likely plays a role in organic matter decomposition, contributing to nutrient cycling within its ecosystem. Its anaerobic nature suggests potential involvement in anaerobic processes, such as those occurring in wetlands or other low-oxygen environments. Overall, Stenotrophomonas rhizophila strain GA1 exemplifies microbial versatility and adaptability, contributing to the dynamism of microbial communities across different habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas rhizophila
Strainstrain GA1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas rhizophila strain GA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete

Gene Summary

Adenine Count

19247 bp

Thymine Count

19690 bp

Guanine Count

24680 bp

Cytosine Count

24775 bp

Genome Length

88392 bp

Protein-coding Genes

90 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lapa family proteinDZC31_20380Not AvailableNegative4300774 - 43010379163.66
integration host factor subunit betaDZC31_20385Not AvailableNegative4301056 - 430135211188.4
hypothetical proteinDZC31_20390Not AvailablePositive4301710 - 430230321225.7
30s ribosomal protein s1DZC31_20395Not AvailableNegative4302451 - 430412761545.1
(d)cmp kinaseDZC31_20400Not AvailableNegative4304251 - 430493724674.6
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferaseDZC31_20405Not AvailableNegative4304934 - 430717479222.9
prephenate dehydrataseDZC31_20410Not AvailableNegative4307336 - 430843040404.5
3-phosphoserine/phosphohydroxythreonine transaminaseDZC31_20415Not AvailableNegative4308430 - 430951539766.1
dna gyrase subunit aDZC31_20420Not AvailableNegative4309665 - 4312427101516.0
hypothetical proteinDZC31_20425Not AvailablePositive4312544 - 43127598013.63

Displaying genes 4281 – 4290 of 5769 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.