Stenotrophomonas rhizophila strain GA1

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas rhizophila strain GA1 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph that thrives in multiple habitats. This strain is anaerobic, meaning it does not require oxygen for growth, and it exhibits mobility due to the presence of flagella. Stenotrophomonas rhizophila strain GA1 falls within the mesophilic temperature range, indicating it optimally grows at moderate temperatures. The strain contains two replicons, which may be indicative of its genetic adaptability and versatility in various environments. Notably, Stenotrophomonas rhizophila strain GA1 is nonsporulating, suggesting it does not form spores as a means of survival under unfavorable conditions. The ecological role of Stenotrophomonas rhizophila strain GA1 can be significant due to its ability to thrive in diverse environments, coupled with its metabolic capabilities. As a chemoheterotroph, it likely plays a role in organic matter decomposition, contributing to nutrient cycling within its ecosystem. Its anaerobic nature suggests potential involvement in anaerobic processes, such as those occurring in wetlands or other low-oxygen environments. Overall, Stenotrophomonas rhizophila strain GA1 exemplifies microbial versatility and adaptability, contributing to the dynamism of microbial communities across different habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas rhizophila
Strainstrain GA1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas rhizophila strain GA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete

Gene Summary

Adenine Count

19247 bp

Thymine Count

19690 bp

Guanine Count

24680 bp

Cytosine Count

24775 bp

Genome Length

88392 bp

Protein-coding Genes

90 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
low molecular weight phosphotyrosine protein phosphataseDZC31_19680Not AvailableNegative4159392 - 415985616823.1
3-deoxy-manno-octulosonate cytidylyltransferaseDZC31_19685Not AvailableNegative4159856 - 416062027776.3
trm112 family proteinDZC31_19690Not AvailableNegative4160617 - 41608026642.14
tetraacyldisaccharide 4'-kinaseDZC31_19695Not AvailableNegative4160846 - 416184736602.2
deor family transcriptional regulatorDZC31_19700Not AvailableNegative4161847 - 416228016007.1
mota/tolq/exbb proton channel family proteinDZC31_19705Not AvailableNegative4162277 - 416291222828.6
deor family transcriptional regulatorDZC31_19710Not AvailableNegative4163076 - 416528179071.5
duf2062 domain-containing proteinDZC31_19715Not AvailablePositive4165424 - 416605023882.4
abc transporter permeaseDZC31_19720Not AvailableNegative4165934 - 416671328595.9
abc transporter atp-binding proteinDZC31_19725Not AvailableNegative4166710 - 416764234424.8

Displaying genes 4141 – 4150 of 5769 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.