Stenotrophomonas rhizophila strain GA1

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas rhizophila strain GA1 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph that thrives in multiple habitats. This strain is anaerobic, meaning it does not require oxygen for growth, and it exhibits mobility due to the presence of flagella. Stenotrophomonas rhizophila strain GA1 falls within the mesophilic temperature range, indicating it optimally grows at moderate temperatures. The strain contains two replicons, which may be indicative of its genetic adaptability and versatility in various environments. Notably, Stenotrophomonas rhizophila strain GA1 is nonsporulating, suggesting it does not form spores as a means of survival under unfavorable conditions. The ecological role of Stenotrophomonas rhizophila strain GA1 can be significant due to its ability to thrive in diverse environments, coupled with its metabolic capabilities. As a chemoheterotroph, it likely plays a role in organic matter decomposition, contributing to nutrient cycling within its ecosystem. Its anaerobic nature suggests potential involvement in anaerobic processes, such as those occurring in wetlands or other low-oxygen environments. Overall, Stenotrophomonas rhizophila strain GA1 exemplifies microbial versatility and adaptability, contributing to the dynamism of microbial communities across different habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas rhizophila
Strainstrain GA1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas rhizophila strain GA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete

Gene Summary

Adenine Count

19247 bp

Thymine Count

19690 bp

Guanine Count

24680 bp

Cytosine Count

24775 bp

Genome Length

88392 bp

Protein-coding Genes

90 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane lipoprotein chaperone lolaDZC31_17520Not AvailableNegative3709551 - 371017422964.5
deor family transcriptional regulatorDZC31_17525Not AvailableNegative3710237 - 371273190575.6
leucyl/phenylalanyl-trna--protein transferaseDZC31_17530Not AvailablePositive3713130 - 371381025319.1
arginyltransferaseDZC31_17535Not AvailablePositive3713867 - 371457427859.4
translation initiation factor if-1DZC31_17540Not AvailablePositive3714675 - 37148938303.06
deor family transcriptional regulatorDZC31_17545Not AvailableNegative3714974 - 37150542475.93
atp-dependent clp protease atp-binding subunit clpaDZC31_17550Not AvailableNegative3715076 - 371734683226.6
atp-dependent clp protease adaptor clpsDZC31_17555Not AvailableNegative3717377 - 371773913617.2
cold shock domain-containing protein cspdDZC31_17560Not AvailablePositive3717970 - 37182248878.42
nadp-dependent isocitrate dehydrogenaseDZC31_17565Not AvailableNegative3718293 - 371954945662.0

Displaying genes 3771 – 3780 of 5769 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.