Stenotrophomonas rhizophila strain GA1

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas rhizophila strain GA1 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph that thrives in multiple habitats. This strain is anaerobic, meaning it does not require oxygen for growth, and it exhibits mobility due to the presence of flagella. Stenotrophomonas rhizophila strain GA1 falls within the mesophilic temperature range, indicating it optimally grows at moderate temperatures. The strain contains two replicons, which may be indicative of its genetic adaptability and versatility in various environments. Notably, Stenotrophomonas rhizophila strain GA1 is nonsporulating, suggesting it does not form spores as a means of survival under unfavorable conditions. The ecological role of Stenotrophomonas rhizophila strain GA1 can be significant due to its ability to thrive in diverse environments, coupled with its metabolic capabilities. As a chemoheterotroph, it likely plays a role in organic matter decomposition, contributing to nutrient cycling within its ecosystem. Its anaerobic nature suggests potential involvement in anaerobic processes, such as those occurring in wetlands or other low-oxygen environments. Overall, Stenotrophomonas rhizophila strain GA1 exemplifies microbial versatility and adaptability, contributing to the dynamism of microbial communities across different habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas rhizophila
Strainstrain GA1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas rhizophila strain GA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete

Gene Summary

Adenine Count

19247 bp

Thymine Count

19690 bp

Guanine Count

24680 bp

Cytosine Count

24775 bp

Genome Length

88392 bp

Protein-coding Genes

90 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv pili biogenesis protein fimtDZC31_03555Not AvailableNegative815271 - 81575017513.3
prepilin-type n-terminal cleavage/methylation domain-containing proteinDZC31_03560Not AvailablePositive815860 - 81618611264.5
pilus assembly protein pilwDZC31_03565Not AvailablePositive816074 - 81668822854.1
hypothetical proteinDZC31_03570Not AvailablePositive816685 - 81715817400.4
prepilin-type n-terminal cleavage/methylation domain-containing proteinDZC31_03575Not AvailablePositive817160 - 81754914007.6
glycine oxidase thioDZC31_03580Not AvailablePositive817603 - 81870038730.6
hypothetical proteinDZC31_03585Not AvailableNegative818777 - 8190078772.63
outer membrane protein assembly factor bamdDZC31_03590Not AvailableNegative819101 - 82012038286.8
23s rrna pseudouridine(1911/1915/1917) synthase rludDZC31_03595Not AvailablePositive820268 - 82123035330.9
peptidoglycan editing factor pgefDZC31_03600Not AvailablePositive821227 - 82196726130.0

Displaying genes 1031 – 1040 of 5769 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.