Syntrophomonas zehnderi OL-4

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Syntrophomonadaceae

Genus

Syntrophomonas

Description

Syntrophomonas zehnderi OL-4 is a Gram-negative, anaerobic, rod-shaped bacterium classified within the mesophilic temperature range, with an optimal growth temperature of 32°C. This organism is notable for its ability to form spores, which may contribute to its survival in various environmental conditions. The bacterium possesses a single replicon, indicating a streamlined genomic organization. The accessions for S. zehnderi OL-4 include CGIH00000000.1, which is relevant for researchers seeking to access genomic data for further study. Ecologically, S. zehnderi OL-4 plays a significant role in anaerobic environments, likely contributing to the degradation of organic matter. This bacterium is involved in syntrophic interactions, where it partners with other microorganisms to facilitate the breakdown of complex substrates. These interactions are crucial for nutrient cycling in anaerobic ecosystems, particularly in environments such as sediments, landfills, and wastewater treatment systems. In summary, Syntrophomonas zehnderi OL-4 exemplifies the diversity of anaerobic bacteria and their pivotal role in ecological processes, underscoring the importance of studying such microorganisms to understand their contributions to biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilySyntrophomonadaceae
GenusSyntrophomonas
SpeciesSyntrophomonas zehnderi
StrainOL-4

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Syntrophomonas zehnderi OL-4 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2623 genes

Non-Coding Genes

211 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobyric acid synthase cobq2368Not AvailablePositive2415339 - 241674251161.8
cobalamin biosynthesis cobd/cbib2369Not AvailablePositive2416743 - 241769634100.9
adenosylcobalamin biosynthesis, atp:cob(i)alamin adenosyltransferase coba/cobo/butr2370Not AvailablePositive2417915 - 241847820626.1
cobalamin (vitamin b12) biosynthesis cobs, cobalamin-5-phosphate synthase2371Not AvailablePositive2418906 - 241965226273.0
pyridoxal phosphate-dependent transferase2372Not AvailablePositive2419696 - 242081441103.5
alpha-ribazole phosphatase, cobc2373Not AvailablePositive2421272 - 242185921826.9
cobalamin (vitamin b12) biosynthesis protein cbim2374Not AvailablePositive2421880 - 242257824207.7
cobalt transport protein cbin2375Not AvailablePositive2422581 - 242288611239.5
abc/ecf transporter, transmembrane component2376Not AvailablePositive2422873 - 242366729463.4
abc transporter-like2377Not AvailablePositive2423649 - 242454833109.9

Displaying genes 2351 – 2360 of 2836 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.