Hyphomicrobium sp. GJ21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium sp. GJ21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium sp. GJ21

Accession NumberCDHO00000000.1

Gene Summary

Adenine Count

757231 bp

Thymine Count

750643 bp

Guanine Count

1157090 bp

Cytosine Count

1177869 bp

Genome Length

3842833 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Baseplate hub subunit and tail lysozymeHYPGJ_21150Not Available-1743607 - 174492046917.9
Tail proteinHYPGJ_21151Not Available-1745308 - 1749255140915.0
Gta-like proteinHYPGJ_21152Not Available-1749259 - 174970816252.4
Minor tail proteinHYPGJ_21153Not Available-1749712 - 175057230553.0
Tail proteinHYPGJ_21154Not Available-1750569 - 175120723154.3
Tail tape measure proteinHYPGJ_21155Not Available-1751220 - 175181319969.0
conserved hypothetical proteinHYPGJ_21156Not Available-1751818 - 17519916204.57
conserved hypothetical proteinHYPGJ_21157Not Available-1751991 - 175237112793.1
Gene transfer aget (gta) orfg9-like phage major tail proteinHYPGJ_21158Not Available-1752532 - 175294514388.9
Tail proteinHYPGJ_21159Not Available-1753166 - 175357915129.5

Displaying genes 1 – 10 of 1404 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

107 records
Metabolite IDMetabolite nameStructureCAS number
BASm0007680isochenodeoxycholateC24H39O4Chemical structure of isochenodeoxycholateNot available
Average391.573Da
Monoisotopic391.2853833Da
BASm00076813-oxochenodeoxycholateC24H37O4Chemical structure of 3-oxochenodeoxycholateNot available
Average389.557Da
Monoisotopic389.2697333Da
BASm0007682isodeoxycholateC24H39O4Chemical structure of isodeoxycholateNot available
Average391.573Da
Monoisotopic391.2853833Da
BASm000768312alpha-hydroxy-3-oxo-5beta-cholan-24-oateC24H37O4Chemical structure of 12alpha-hydroxy-3-oxo-5beta-cholan-24-oateNot available
Average389.557Da
Monoisotopic389.2697333Da
BASm0007684isocholateC24H39O5Chemical structure of isocholateNot available
Average407.572Da
Monoisotopic407.2802979Da
BASm00076857alpha,12alpha-dihydroxy-3-oxo-5beta-cholan-24-oateC24H37O5Chemical structure of 7alpha,12alpha-dihydroxy-3-oxo-5beta-cholan-24-oateNot available
Average405.556Da
Monoisotopic405.2646479Da
BASm00077259-ribosyl-trans-zeatin 5'-phosphateC15H20N5O8PChemical structure of 9-ribosyl-trans-zeatin 5'-phosphateNot available
Average429.327Da
Monoisotopic429.106046782Da
BASm00081024-methylpentanoyl-CoAC27H42N7O17P3SChemical structure of 4-methylpentanoyl-CoANot available
Average861.65Da
Monoisotopic861.1592694Da
BASm0008825O-succinyl-L-serineC7H10NO6Chemical structure of O-succinyl-L-serineNot available
Average204.159Da
Monoisotopic204.051360626Da
BASm0009166N-(4-oxoglutaryl)-L-cysteinylglycineC10H12N2O7SNot availableNot available
Average304.27Da
Monoisotopic304.037619068Da

Displaying 81–90 of 107 metabolites