Hyphomicrobium sp. GJ21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium sp. GJ21
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomicrobium sp. GJ21

Accession NumberCDHO00000000.1

Gene Summary

Adenine Count

757231 bp

Thymine Count

750643 bp

Guanine Count

1157090 bp

Cytosine Count

1177869 bp

Genome Length

3842833 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Baseplate hub subunit and tail lysozymeHYPGJ_21150Not Available-1743607 - 174492046917.9
Tail proteinHYPGJ_21151Not Available-1745308 - 1749255140915.0
Gta-like proteinHYPGJ_21152Not Available-1749259 - 174970816252.4
Minor tail proteinHYPGJ_21153Not Available-1749712 - 175057230553.0
Tail proteinHYPGJ_21154Not Available-1750569 - 175120723154.3
Tail tape measure proteinHYPGJ_21155Not Available-1751220 - 175181319969.0
conserved hypothetical proteinHYPGJ_21156Not Available-1751818 - 17519916204.57
conserved hypothetical proteinHYPGJ_21157Not Available-1751991 - 175237112793.1
Gene transfer aget (gta) orfg9-like phage major tail proteinHYPGJ_21158Not Available-1752532 - 175294514388.9
Tail proteinHYPGJ_21159Not Available-1753166 - 175357915129.5

Displaying genes 1 – 10 of 1404 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

107 records
Metabolite IDMetabolite nameStructureCAS number
BASm0005893(3R)-hydroxy-(7Z,10Z,13Z,16Z)-docosatetraenoyl-CoAC43H66N7O18P3SChemical structure of (3R)-hydroxy-(7Z,10Z,13Z,16Z)-docosatetraenoyl-CoANot available
Average1094.02Da
Monoisotopic1093.341985Da
BASm0005917(3R)-hydroxy-(7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoAC43H64N7O18P3SChemical structure of (3R)-hydroxy-(7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoANot available
Average1092Da
Monoisotopic1091.326335Da
BASm0006317hydrogenobyrinate a,c-diamideC45H62N6O12Chemical structure of hydrogenobyrinate a,c-diamideNot available
Average879.021Da
Monoisotopic878.4425715Da
BASm0006661UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamineC43H75N3O20P2Chemical structure of UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamineNot available
Average1016.0112Da
Monoisotopic1015.441915Da
BASm00068103-(methylsulfanyl)propanoyl-CoAC25H38N7O17P3S2Chemical structure of 3-(methylsulfanyl)propanoyl-CoANot available
Average865.65Da
Monoisotopic865.1000405Da
BASm0007003UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateC35H51N7O26P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateNot available
Average1047.7583Da
Monoisotopic1047.235898Da
BASm0007086(2E)-dodecenoateC12H21O2Chemical structure of (2E)-dodecenoateNot available
Average197.299Da
Monoisotopic197.1547035Da
BASm00072473-(methylsulfanyl)acryloyl-CoAC25H36N7O17P3S2Chemical structure of 3-(methylsulfanyl)acryloyl-CoANot available
Average863.64Da
Monoisotopic863.0843904Da
BASm0007594N(7)-methyl-GTPC11H15N5O14P3Chemical structure of N(7)-methyl-GTPNot available
Average534.185Da
Monoisotopic533.9844819Da
BASm0007679isolithocholateC24H39O3Chemical structure of isolithocholateNot available
Average375.574Da
Monoisotopic375.2904687Da

Displaying 71–80 of 107 metabolites