Xenorhabdus nematophila str. Websteri

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus nematophila str. Websteri is a Gram-negative bacterium that is primarily found in host-associated environments. This organism exhibits a rod shape and is a facultative anaerobe, allowing it to thrive in varying oxygen conditions. X. nematophila str. Websteri is characterized by having a single replicon and two membranes, which is typical for Gram-negative bacteria. Notably, this strain is non-motile, indicating that it does not possess the ability to move independently, despite having flagella. Its temperature range is mesophilic, suggesting that it prefers moderate temperature environments for optimal growth. Xenorhabdus nematophila str. Websteri exists as a free-living organism, indicating it can survive independently in its habitat, though it is often associated with nematodes, which can act as its hosts. This biotic relationship is significant as it highlights the potential ecological role of X. nematophila in biological control, particularly in the context of pest management, where it may contribute to the health of nematode populations and their effectiveness in controlling agricultural pests. The accession number for this strain is CCWW00000000.1, which provides a reference for genomic and other biological data associated with this organism. Understanding the traits and ecological roles of Xenorhabdus nematophila str. Websteri can contribute to the development of biocontrol strategies in agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus nematophila
StrainWebsteri

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xenorhabdus nematophila str. Websteri
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus nematophila str. Websteri genome assembly XNW1, contig

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3475 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic l-asparaginase iiXNW1_4730007Not AvailablePositive5150364 - 515140736649.8
putative nonribosomal peptide synthase (nrps)XNW1_4730008Not AvailableNegative5151464 - 5154523115953.0
3-phosphoserine/phosphohydroxythreonine aminotransferaseXNW1_4730009Not AvailablePositive5154898 - 515598640015.6
3-enolpyruvylshikimate-5-phosphate synthetaseXNW1_4730010Not AvailablePositive5156145 - 515743146598.9
cytidine monophosphate (cmp) kinaseXNW1_4730011Not AvailablePositive5157651 - 515833724885.9
30s ribosomal subunit protein s1XNW1_4730012Not AvailablePositive5158532 - 516020561365.7
integration host factor (ihf), beta subunit, site-specific recombinationXNW1_4730013Not AvailablePositive5160281 - 516057110883.0
putative recombination protein with metallo-hydrolase domainXNW1_4730014Not AvailablePositive5160775 - 516312090108.8
lipid transport protein, flippase (abc superfamily, membrane (n-terminal), atp_bind (c-terminal))XNW1_4730015Not AvailablePositive5163158 - 516490364172.7
tetraacyldisaccharide 4' kinase (lipid a 4'kinase)XNW1_4730016Not AvailablePositive5164900 - 516589536564.3

Displaying genes 4931 – 4940 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.