Xenorhabdus nematophila str. Websteri

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus nematophila str. Websteri is a Gram-negative bacterium that is primarily found in host-associated environments. This organism exhibits a rod shape and is a facultative anaerobe, allowing it to thrive in varying oxygen conditions. X. nematophila str. Websteri is characterized by having a single replicon and two membranes, which is typical for Gram-negative bacteria. Notably, this strain is non-motile, indicating that it does not possess the ability to move independently, despite having flagella. Its temperature range is mesophilic, suggesting that it prefers moderate temperature environments for optimal growth. Xenorhabdus nematophila str. Websteri exists as a free-living organism, indicating it can survive independently in its habitat, though it is often associated with nematodes, which can act as its hosts. This biotic relationship is significant as it highlights the potential ecological role of X. nematophila in biological control, particularly in the context of pest management, where it may contribute to the health of nematode populations and their effectiveness in controlling agricultural pests. The accession number for this strain is CCWW00000000.1, which provides a reference for genomic and other biological data associated with this organism. Understanding the traits and ecological roles of Xenorhabdus nematophila str. Websteri can contribute to the development of biocontrol strategies in agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus nematophila
StrainWebsteri

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xenorhabdus nematophila str. Websteri
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus nematophila str. Websteri genome assembly XNW1, contig

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3475 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonucleoside-diphosphate reductase 1, beta subunitXNW1_4220002Not AvailableNegative3747617 - 374874743505.8
ribonucleoside diphosphate reductase 1, alpha subunitXNW1_4220003Not AvailableNegative3748760 - 375105185753.0
bifunctional: 3-demethylubiquinone-9 3-methyltransferaseXNW1_4220004Not AvailableNegative3751447 - 375219928256.0
dna gyrase, subunit a, type ii topoisomeraseXNW1_4220005Not AvailablePositive3752403 - 375504297751.1
hybrid sensory histidine kinase in two-component regulatory system with rcsb and yojn, regulates capsule biosynthesis, cell division genes, osmc expressionXNW1_4220006Not AvailablePositive3755294 - 3758086105702.0
response regulator (positive) in two-component regulatory system with rcsc and yojn, regulates capsule biosynthesis, cell division genes, osmc expression (luxr/uhpa familiy)XNW1_4220007Not AvailableNegative3758154 - 375880423713.0
putative sensory histidine kinase (phosphotransfer intermediate) associated with the rcsbc two-component regulatory systemXNW1_4220008Not AvailableNegative3758806 - 3761580106329.0
Trna-serNot AvailableNot AvailablePositive3761792 - 3761879Not Available
Trna-thrNot AvailableNot AvailablePositive3761886 - 3761961Not Available
tyrosine-specific transport protein (haaap family)XNW1_4220009Not AvailablePositive3762419 - 376362442603.7

Displaying genes 3661 – 3670 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.