Xenorhabdus nematophila str. Websteri

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus nematophila str. Websteri is a Gram-negative bacterium that is primarily found in host-associated environments. This organism exhibits a rod shape and is a facultative anaerobe, allowing it to thrive in varying oxygen conditions. X. nematophila str. Websteri is characterized by having a single replicon and two membranes, which is typical for Gram-negative bacteria. Notably, this strain is non-motile, indicating that it does not possess the ability to move independently, despite having flagella. Its temperature range is mesophilic, suggesting that it prefers moderate temperature environments for optimal growth. Xenorhabdus nematophila str. Websteri exists as a free-living organism, indicating it can survive independently in its habitat, though it is often associated with nematodes, which can act as its hosts. This biotic relationship is significant as it highlights the potential ecological role of X. nematophila in biological control, particularly in the context of pest management, where it may contribute to the health of nematode populations and their effectiveness in controlling agricultural pests. The accession number for this strain is CCWW00000000.1, which provides a reference for genomic and other biological data associated with this organism. Understanding the traits and ecological roles of Xenorhabdus nematophila str. Websteri can contribute to the development of biocontrol strategies in agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus nematophila
StrainWebsteri

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xenorhabdus nematophila str. Websteri
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus nematophila str. Websteri genome assembly XNW1, contig

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3475 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylase, plp-bindingXNW1_3080031Not AvailablePositive2693750 - 269504547665.9
acyl coenzyme a dehydrogenaseXNW1_3080032Not AvailableNegative2695109 - 269755689190.0
d-sedoheptulose 7-phosphate isomeraseXNW1_3080033Not AvailablePositive2697809 - 269839020817.0
putative glutamine amidotransferaseXNW1_3080034Not AvailablePositive2698438 - 269920529028.6
conserved hypothetical proteinXNW1_3080035Not AvailableNegative2699217 - 269958214430.2
na(+)-translocating nadh-quinone reductase subunit a (na(+)-translocating nqr subunit a) (na(+)-nqr subunit a) (nqr complex subunit a) (nqr-1 subunit a)XNW1_3080036Not AvailablePositive2700043 - 270138648916.1
na(+)-translocating nadh-quinone reductase subunit b (na(+)-translocating nqr subunit b) (na(+)-nqr subunit b) (nqr complex subunit b) (nqr-1 subunit b)XNW1_3080037Not AvailablePositive2701390 - 270262845119.7
na(+)-translocating nadh-quinone reductase subunit c (na(+)-translocating nqr subunit c) (na(+)-nqr subunit c) (nqr complex subunit c) (nqr-1 subunit c)XNW1_3080038Not AvailablePositive2702621 - 270341528786.6
putative nadh-quinone reductase, membrane proteinXNW1_3080039Not AvailablePositive2703408 - 270403722621.4
putative oxidoreductase, inner membrane proteinXNW1_3080040Not AvailablePositive2704046 - 270464221385.9

Displaying genes 2701 – 2710 of 5953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.