Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | PPBDW_I20302 | Not Available | Positive | 699048 - 699776 | 26817.4 |
| protein chain elongation factor ef-ts | PPBDW_I20303 | Not Available | Positive | 699895 - 700740 | 29908.0 |
| uridylate kinase | PPBDW_I20304 | Not Available | Positive | 700832 - 701560 | 26196.9 |
| ribosome recycling factor | PPBDW_I20305 | Not Available | Positive | 701628 - 702185 | 20812.2 |
| undecaprenyl pyrophosphate synthase | PPBDW_I20306 | Not Available | Positive | 702263 - 703024 | 28662.6 |
| cdp-diglyceride synthase | PPBDW_I20307 | Not Available | Positive | 703050 - 703976 | 33607.2 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | PPBDW_I20308 | Not Available | Positive | 704043 - 705239 | 42582.9 |
| zinc metallopeptidase | PPBDW_I20309 | Not Available | Positive | 705236 - 706591 | 49046.1 |
| outer membrane protein assembly factor | PPBDW_I20310 | Not Available | Positive | 706628 - 709033 | 89621.1 |
| putative periplasmic chaperone opmh | PPBDW_I20311 | Not Available | Positive | 709050 - 709559 | 18810.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


