Photobacterium kishitanii strain ANT-2200

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium kishitanii strain ANT-2200 is a bacterium notable for its flagella presence, indicating its capability for motility. This feature may facilitate its interaction with various environments, including aquatic ecosystems where it can be found. The strain possesses a single replicon, suggesting a streamlined genomic structure that could be advantageous for its adaptability and survival. This particular strain has been identified as a host-associated organism, specifically with Oncorhynchus mykiss, commonly known as the rainbow trout. This association implies that P. kishitanii may play a role in the microbiome of this fish species, potentially influencing its health and ecological dynamics. The relationship between the bacterium and its host could shed light on the microbial interactions that support the well-being of aquatic organisms. The accession number for Photobacterium kishitanii strain ANT-2200 is CCAR000000000.2, which provides a reference point for further genomic and ecological studies. Understanding such microbial-host interactions is essential for comprehending the broader ecological roles that bacteria play in aquatic environments, particularly in relation to fish health and the maintenance of biodiversity in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium kishitanii
Strainstrain ANT-2200

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium kishitanii strain ANT-2200 genome assembly, contig:

Gene Summary

Adenine Count

1557531 bp

Thymine Count

1554378 bp

Guanine Count

991850 bp

Cytosine Count

987991 bp

Genome Length

5091755 bp

Protein-coding Genes

4540 genes

Non-Coding Genes

293 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anaerobic sulfite reductase subunit bPPBDW_I20244Not AvailableNegative626973 - 62779430950.3
anaerobic sulfite reductase subunit aPPBDW_I20245Not AvailableNegative627787 - 62885140861.1
uroporphyrin-iii c-methyltransferasePPBDW_I20246Not AvailableNegative628863 - 62967229127.3
carbon starvation protein cstaPPBDW_I20247Not AvailableNegative629866 - 63135953821.0
3-deoxy-d-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressiblePPBDW_I20248Not AvailablePositive631728 - 63279839003.6
fused chorismate mutase tPPBDW_I20249Not AvailablePositive632834 - 63397342870.8
fused chorismate mutase pPPBDW_I20250Not AvailableNegative634072 - 63525043787.3
cold shock protein associated with 30s ribosomal subunitPPBDW_I20251Not AvailableNegative635409 - 63578314094.8
putative lipoproteinPPBDW_I20252Not AvailableNegative636174 - 63690227982.4
23s rrna pseudouridine synthasePPBDW_I20253Not AvailablePositive637075 - 63804936960.8

Displaying genes 821 – 830 of 1372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.