Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved exported hypothetical protein | PPBDW_I20185 | Not Available | Positive | 563745 - 563945 | 7226.82 |
| bacterial regulatory helix-turn-helix, lysr family protein | PPBDW_I20186 | Not Available | Negative | 563986 - 564936 | 35790.7 |
| ybak / prolyl-trna synthetases associated domain protein | PPBDW_I20187 | Not Available | Negative | 565014 - 565499 | 17197.1 |
| enzyme component involved in 2-methylthio-6-iodeadenosine formation | PPBDW_I20188 | Not Available | Negative | 565489 - 566469 | 35607.2 |
| conserved hypothetical protein | PPBDW_I20189 | Not Available | Positive | 566722 - 566982 | 10079.2 |
| conserved hypothetical protein | PPBDW_I20190 | Not Available | Positive | 567050 - 567385 | 13475.6 |
| l-aspartate oxidase (quinolinate synthetase b) | PPBDW_I20191 | Not Available | Negative | 567438 - 569054 | 60226.4 |
| rna polymerase, sigma 24 (sigma e) factor | PPBDW_I20192 | Not Available | Positive | 569577 - 570155 | 21878.0 |
| anti-sigma factor | PPBDW_I20193 | Not Available | Positive | 570158 - 570829 | 24446.7 |
| anti-sigma factor | PPBDW_I20194 | Not Available | Positive | 570829 - 571815 | 36794.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


