Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, alpha subunit | PPBDW_I10338 | Not Available | Positive | 369890 - 370879 | 36314.4 |
| 50s ribosomal protein l17 | PPBDW_I10339 | Not Available | Positive | 370914 - 371297 | 14422.6 |
| Trna-thr | Not Available | Not Available | Positive | 372333 - 372408 | Not Available |
| homoserine transsuccinylase | PPBDW_I20001 | Not Available | Positive | 372736 - 373677 | 36323.1 |
| na(+)/h(+) antiporter nhap | PPBDW_I20002 | Not Available | Negative | 373732 - 375015 | 47197.8 |
| homocysteine-n5-methyltetrahydrofolate transmethylase, b12-dependent | PPBDW_I20003 | Not Available | Positive | 375197 - 378865 | 135157.0 |
| aspartokinase iii | PPBDW_I20004 | Not Available | Negative | 378933 - 380306 | 48963.9 |
| serine--pyruvate aminotransferase | PPBDW_I20005 | Not Available | Positive | 380801 - 381919 | 40619.3 |
| conserved membrane hypothetical protein | PPBDW_I20006 | Not Available | Negative | 381973 - 383718 | 66027.1 |
| atpase and dna damage recognition protein of nucleotide excision repair excinuclease uvrabc | PPBDW_I20007 | Not Available | Negative | 383793 - 386621 | 103851.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


