Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly pilm family protein | PPBDW_I10273 | Not Available | Positive | 321085 - 322065 | 36358.8 |
| conserved exported hypothetical protein | PPBDW_I10274 | Not Available | Positive | 322062 - 322670 | 22893.7 |
| pilus assembly, pilo family protein | PPBDW_I10275 | Not Available | Positive | 322667 - 323251 | 22236.9 |
| conserved exported hypothetical protein | PPBDW_I10276 | Not Available | Positive | 323262 - 323777 | 19079.7 |
| putative fimbrial assembly protein | PPBDW_I10277 | Not Available | Positive | 323791 - 325512 | 62639.6 |
| Ribosomal rna 5s ribosomal rna | Not Available | Not Available | Positive | 325874 - 325988 | Not Available |
| shikimate kinase i | PPBDW_I10278 | Not Available | Positive | 325899 - 326417 | 19476.1 |
| Ribosomal rna 23s ribosomal rna | Not Available | Not Available | Positive | 326127 - 329018 | Not Available |
| 3-dehydroquinate synthase | PPBDW_I10279 | Not Available | Positive | 326441 - 327520 | 38700.7 |
| conserved hypothetical protein | PPBDW_I10280 | Not Available | Positive | 327535 - 328998 | 53814.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


