Photobacterium kishitanii strain ANT-2200

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium kishitanii strain ANT-2200 is a bacterium notable for its flagella presence, indicating its capability for motility. This feature may facilitate its interaction with various environments, including aquatic ecosystems where it can be found. The strain possesses a single replicon, suggesting a streamlined genomic structure that could be advantageous for its adaptability and survival. This particular strain has been identified as a host-associated organism, specifically with Oncorhynchus mykiss, commonly known as the rainbow trout. This association implies that P. kishitanii may play a role in the microbiome of this fish species, potentially influencing its health and ecological dynamics. The relationship between the bacterium and its host could shed light on the microbial interactions that support the well-being of aquatic organisms. The accession number for Photobacterium kishitanii strain ANT-2200 is CCAR000000000.2, which provides a reference point for further genomic and ecological studies. Understanding such microbial-host interactions is essential for comprehending the broader ecological roles that bacteria play in aquatic environments, particularly in relation to fish health and the maintenance of biodiversity in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium kishitanii
Strainstrain ANT-2200

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium kishitanii strain ANT-2200 genome assembly, contig:

Gene Summary

Adenine Count

1557531 bp

Thymine Count

1554378 bp

Guanine Count

991850 bp

Cytosine Count

987991 bp

Genome Length

5091755 bp

Protein-coding Genes

4540 genes

Non-Coding Genes

293 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional repressor of sos regulonPPBDW_I10176Not AvailablePositive221668 - 22228822730.6
cytochrome c oxidase subunit 2PPBDW_I10177Not AvailablePositive222571 - 22370742079.0
cytochrome c oxidase subunit 1PPBDW_I10178Not AvailablePositive223726 - 22531559087.4
cytochrome c oxidase assembly protein ctagPPBDW_I10179Not AvailablePositive225327 - 22590521288.4
cytochrome c oxidase subunit iii family proteinPPBDW_I10180Not AvailablePositive225889 - 22679133378.9
putative membrane protein. in ss9 wap3 not in 3tck. small protein of 70 aaPPBDW_I10181Not AvailableNegative226803 - 2270157786.28
conserved membrane hypothetical proteinPPBDW_I10182Not AvailablePositive227086 - 22776926346.4
conserved exported hypothetical proteinPPBDW_I10183Not AvailablePositive227766 - 22829919717.4
conserved membrane hypothetical proteinPPBDW_I10184Not AvailablePositive228329 - 22938439041.1
protoheme ix farnesyltransferasePPBDW_I10185Not AvailablePositive229377 - 23030633895.5

Displaying genes 391 – 400 of 1372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.