Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | PPBDW_I10130 | Not Available | Positive | 172655 - 172864 | 7848.29 |
| cold shock-like protein | PPBDW_I10131 | Not Available | Positive | 173077 - 173289 | 7524.82 |
| cold shock-like protein | PPBDW_I10132 | Not Available | Positive | 173542 - 173754 | 7510.79 |
| cold shock-like protein | PPBDW_I10133 | Not Available | Positive | 174007 - 174219 | 7524.81 |
| biodegradative arginine decarboxylase | PPBDW_I10134 | Not Available | Negative | 174423 - 176726 | 85640.7 |
| putrescine/proton symporter: putrescine/ornithine antiporter | PPBDW_I10135 | Not Available | Negative | 176912 - 178237 | 46703.8 |
| biodegradative arginine decarboxylase | PPBDW_I10136 | Not Available | Negative | 178873 - 181176 | 85614.5 |
| putrescine/proton symporter: putrescine/ornithine antiporter | PPBDW_I10137 | Not Available | Negative | 181396 - 182721 | 46676.8 |
| biodegradative arginine decarboxylase | PPBDW_I10138 | Not Available | Negative | 183375 - 185678 | 85614.5 |
| putrescine/proton symporter: putrescine/ornithine antiporter | PPBDW_I10139 | Not Available | Negative | 185892 - 187217 | 46600.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


