Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa,dna-binding transcriptional dual regulator | PPBDW_I10062 | Not Available | Positive | 87582 - 88979 | 52957.4 |
| dna polymerase iii, beta subunit | PPBDW_I10063 | Not Available | Positive | 88981 - 90081 | 40773.8 |
| Ribosomal rna 16s ribosomal rna | Not Available | Not Available | Positive | 90054 - 91586 | Not Available |
| gap repair protein | PPBDW_I10064 | Not Available | Positive | 90084 - 91166 | 40852.3 |
| dna gyrase, subunit b (type ii topoisomerase) | PPBDW_I10065 | Not Available | Positive | 91182 - 93602 | 89859.6 |
| Ribosomal rna 5s ribosomal rna | Not Available | Not Available | Positive | 92009 - 92123 | Not Available |
| Ribosomal rna 23s ribosomal rna | Not Available | Not Available | Positive | 92262 - 95153 | Not Available |
| valine-pyruvate aminotransferase | PPBDW_I10066 | Not Available | Negative | 93698 - 94948 | 46132.6 |
| Ribosomal rna 5s ribosomal rna | Not Available | Not Available | Positive | 95173 - 95287 | Not Available |
| glycine trna synthetase, beta subunit | PPBDW_I10067 | Not Available | Negative | 95185 - 97254 | 75374.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


