Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n5-carboxyaminoimidazole ribonucleotide synthase | PPBDW_I10007 | Not Available | Positive | 36345 - 37463 | 40432.9 |
| putative dna topoisomerase | PPBDW_I10008 | Not Available | Negative | 37527 - 38087 | 21027.4 |
| conserved hypothetical protein | PPBDW_I10009 | Not Available | Negative | 38090 - 38563 | 18482.0 |
| conserved hypothetical protein | PPBDW_I10010 | Not Available | Negative | 38566 - 39672 | 39533.6 |
| lysm domain protein | PPBDW_I10011 | Not Available | Negative | 39672 - 40742 | 39770.2 |
| peptide deformylase | PPBDW_I10012 | Not Available | Positive | 41090 - 41590 | 18454.3 |
| 10-formyltetrahydrofolate:l-methionyl- trna(fmet) n-formyltransferase | PPBDW_I10013 | Not Available | Positive | 41615 - 42559 | 33979.9 |
| 16s rrna m5c967 methyltransferase,s-adenosyl-l-methionine-dependent | PPBDW_I10014 | Not Available | Positive | 42645 - 43925 | 47412.9 |
| nad-binding component of trk potassium transporter | PPBDW_I10015 | Not Available | Positive | 44052 - 45428 | 50408.7 |
| trk system potassium uptake protein | PPBDW_I10016 | Not Available | Positive | 45435 - 46880 | 52140.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


