Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium kishitanii |
| Strain | strain ANT-2200 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1557531 bp
Thymine Count
1554378 bp
Guanine Count
991850 bp
Cytosine Count
987991 bp
Genome Length
5091755 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
293 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved exported hypothetical protein. in ss9 not in 3tck | PPBDW_I20667 | Not Available | Negative | 1097909 - 1099483 | 59110.4 |
| adenylosuccinate lyase | PPBDW_I20668 | Not Available | Negative | 1099939 - 1101306 | 51428.5 |
| putative inner membrane protein | PPBDW_I20669 | Not Available | Negative | 1101395 - 1102012 | 22573.5 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | PPBDW_I20670 | Not Available | Negative | 1102027 - 1103142 | 41605.5 |
| 23s rrna pseudouridine synthase | PPBDW_I20671 | Not Available | Negative | 1103504 - 1104154 | 24474.5 |
| isocitrate dehydrogenase | PPBDW_I20672 | Not Available | Positive | 1104298 - 1105551 | 45690.9 |
| hypothetical protein | PPBDW_I20673 | Not Available | Negative | 1105555 - 1105764 | 8239.38 |
| cold shock protein homolog | PPBDW_I20674 | Not Available | Negative | 1106079 - 1106300 | 7988.25 |
| regulatory protein for clpa substrate specificity | PPBDW_I20675 | Not Available | Positive | 1106521 - 1106841 | 12220.8 |
| atp-binding protease component | PPBDW_I20676 | Not Available | Positive | 1106889 - 1109156 | 83877.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


