Ruminococcus torques CAG:61

Gram-positiveCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Mediterraneibacter

Description

Ruminococcus torques CAG:61 is a Gram-positive, anaerobic coccus that belongs to the diverse genus Ruminococcus, which is primarily associated with the gastrointestinal tracts of various mammals. This microbe's Gram-positive cell wall structure suggests the presence of a thick peptidoglycan layer, which is characteristic of many members of the Firmicutes phylum. The coccoid morphology likely facilitates its survival in the anaerobic environments of the gut, where it may play a role in the fermentation of complex carbohydrates. As an anaerobic organism, Ruminococcus torques CAG:61 thrives in environments devoid of oxygen, which is typical for gut microbiota. The ability to metabolize polysaccharides could contribute to the overall fermentation processes within the gut, aiding in the breakdown of dietary fibers and the production of short-chain fatty acids, which are essential for host health. The presence of Ruminococcus torques CAG:61 in the gut microbiome may reflect its potential function in maintaining a balanced microbial community and supporting the digestion of plant materials. Its specific interactions with other gut microbes and its role in metabolic functions underscore the complexity of gut ecosystems. Further research may elucidate its contributions to host metabolism and its impact on gut health, particularly in the context of diet and microbial diversity.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusMediterraneibacter
SpeciesMediterraneibacter torques
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus torques CAG:61


Gene Summary

Adenine Count

687732 bp

Thymine Count

683064 bp

Guanine Count

496168 bp

Cytosine Count

492997 bp

Genome Length

2359968 bp

Protein-coding Genes

1999 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitBN734_01574Not Available+463146 - 46382926090.9
Portal proteinBN734_01575Not Available+463848 - 46520650603.7
Putative clp peptidaseBN734_01576Not Available+465214 - 46583422515.6
Putative major capsid proteinBN734_01577Not Available+465841 - 46703143883.3
Phage dna packaging proteinBN734_01578Not Available+467095 - 46736710416.4
Head-tail adaptor proteinBN734_01579Not Available+467367 - 46770212572.1
Hypothetical proteinBN734_01580Not Available+467702 - 46807913611.1
Putative aminopeptidaseBN734_01581Not Available+468079 - 46839612450.6
Major tail proteinBN734_01582Not Available+468400 - 46898721452.9
Hypothetical proteinBN734_01583Not Available+468989 - 46936314233.0

Displaying genes 1 – 10 of 2055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

246 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 246 metabolites