Streptococcus pneumoniae strain GPSC13

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pneumoniae strain GPSC13 is a Gram-positive bacterium characterized by its cocci shape and a typical arrangement in chains or pairs. This strain is non-motile and lacks flagella. As a facultative anaerobe, it can thrive in both aerobic and anaerobic environments, with an optimal growth temperature of 30°C, placing it within the mesophilic temperature range. S. pneumoniae GPSC13 is notable for its pathogenicity in humans, causing a wide array of health issues, including pneumonia, bacteremia, meningitis, and various forms of infections such as sepsis and otitis media. Its ability to affect multiple hosts extends beyond humans (Homo sapiens) to include domesticated animals such as chickens (Gallus gallus), guinea pigs (Cavia), and other small mammals like Meriones unguiculatus and Chinchilla. This adaptability to different hosts underlines its ecological versatility. With a single replicon and one membrane, GPSC13 exists as a free-living organism, which contributes to its capacity to colonize diverse environments. The strain's involvement in severe health conditions, particularly invasive pneumococcal disease (IPD), highlights its significant public health impact. Understanding the ecological and biological traits of S. pneumoniae GPSC13 is crucial for developing effective strategies for prevention and treatment of the infections it causes, especially in vulnerable populations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pneumoniae
Strainstrain GPSC13

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pneumoniae strain GPSC13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Cavia
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pneumoniae strain GPSC13 genome assembly, contig:

Gene Summary

Adenine Count

640040 bp

Thymine Count

639695 bp

Guanine Count

402865 bp

Cytosine Count

436319 bp

Genome Length

2121147 bp

Protein-coding Genes

1994 genes

Non-Coding Genes

167 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is630-spn1, transposase orf1SAMEA2659086_01600Not AvailableNegative1593193 - 159352212664.2
glycerophosphoryl diester phosphodiesterase family proteinSAMEA2659086_01601Not AvailableNegative1593736 - 159549968929.0
dna polymerase iii subunit epsilonSAMEA2659086_01602Not AvailableNegative1595508 - 159609822136.7
dna-binding proteinSAMEA2659086_01603Not AvailableNegative1596196 - 159668718971.7
5'-methylthioadenosine nucleosidase/s-adenosylhomocysteine nucleosidaseSAMEA2659086_01604Not AvailableNegative1596764 - 159745624652.4
membrane proteinSAMEA2659086_01605Not AvailableNegative1597473 - 159778711809.5
mutt/nudix hydrolase family proteinSAMEA2659086_01606Not AvailableNegative1597799 - 159834420515.5
bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferaseSAMEA2659086_01607Not AvailableNegative1598354 - 159973349403.6
lysozymeSAMEA2659086_01608Not AvailablePositive1599877 - 160067730054.7
integral membrane proteinSAMEA2659086_01609Not AvailablePositive1600772 - 160161430548.3

Displaying genes 1681 – 1690 of 2161 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Community acquired pneumoniaCausesPMC10663590
Bacterial pneumoniaCausesPMC10663590
MeningitisCausesPMC11116026
EncephalitisCausesPMC11116026
SinusitisCausesPMC12375837
MeningitisCausesPMC12680174
PneumoniaCausesPMC12680174
Otitis mediaCausesPMC3695778
Purulent pericarditisCausesPMC3853837
InfectionsCausesPMC4120200

Displaying health effects 1 – 10 of 79 in total