Streptococcus pneumoniae strain GPSC38

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pneumoniae strain GPSC38 is a Gram-positive bacterium characterized by its cocci shape and tendency to form chains or pairs. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments, with an optimal growth temperature of 30°C, placing it within the mesophilic temperature range. This strain has a single membrane and two replicons, indicating a relatively simple genomic organization. GPSC38 is known to inhabit multiple environments and is free-living, though it is also associated with various hosts, including humans (Homo sapiens), chickens (Gallus gallus), guinea pigs (Cavia), Mongolian gerbils (Meriones unguiculatus), and chinchillas. This broad host range highlights its ecological versatility. Clinically, Streptococcus pneumoniae strain GPSC38 is significant due to its pathogenicity in humans. It is associated with a variety of serious health conditions, including bacteremia, pneumonia, meningitis, sepsis, and otitis media, among others. The diverse array of diseases linked to this strain emphasizes its role as a major human pathogen that can cause both invasive and non-invasive infections. The ecological insight derived from GPSC38's traits is its adaptability to various hosts and environments, which facilitates its transmission and persistence in different ecological niches. This adaptability, combined with its pathogenic potential, underscores the importance of monitoring and studying this strain to understand its behavior and impact on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pneumoniae
Strainstrain GPSC38

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pneumoniae strain GPSC38
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Cavia
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pneumoniae strain GPSC38


Gene Summary

Adenine Count

666120 bp

Thymine Count

682140 bp

Guanine Count

432185 bp

Cytosine Count

440721 bp

Genome Length

2221228 bp

Protein-coding Genes

2198 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive1 - 114Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive22 - 135Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive23 - 136Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive194 - 3093Not Available
uncharacterised proteinSAMEA3354337_00001Not AvailableNegative954 - 131914064.2
degenerate transposaseSAMEA3354337_00002Not AvailableNegative1422 - 16076799.01
degenerate transposaseSAMEA3354337_00003Not AvailableNegative1709 - 237725865.7
16s ribosomal rnaNot AvailableNot AvailablePositive3349 - 4882Not Available
tn5252, relaxaseSAMEA3354337_00004Not AvailableNegative2642 - 449273324.4
tn5252, orf 9 proteinSAMEA3354337_00005Not AvailableNegative4479 - 484414341.4

Displaying genes 1 – 10 of 4564 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC8445455
Acute otitis media (aom)CausesPMC8445455
Acute respiratory infectionsCausesPMC8627214
Invasive pneumococcal diseaseCausesPMC8627214
IpdCausesPMC8627214
PneumoniaCausesPMC8627214
SepsisCausesPMC8627214
MeningitisCausesPMC8627214
Collection of fluid (either purulent or transudate) in the middle earCausesPMC9318310
Middle ear infectionsCausesPMC9318310

Displaying health effects 41 – 50 of 79 in total