Streptococcus pneumoniae strain GPSC38

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pneumoniae strain GPSC38 is a Gram-positive bacterium characterized by its cocci shape and tendency to form chains or pairs. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments, with an optimal growth temperature of 30°C, placing it within the mesophilic temperature range. This strain has a single membrane and two replicons, indicating a relatively simple genomic organization. GPSC38 is known to inhabit multiple environments and is free-living, though it is also associated with various hosts, including humans (Homo sapiens), chickens (Gallus gallus), guinea pigs (Cavia), Mongolian gerbils (Meriones unguiculatus), and chinchillas. This broad host range highlights its ecological versatility. Clinically, Streptococcus pneumoniae strain GPSC38 is significant due to its pathogenicity in humans. It is associated with a variety of serious health conditions, including bacteremia, pneumonia, meningitis, sepsis, and otitis media, among others. The diverse array of diseases linked to this strain emphasizes its role as a major human pathogen that can cause both invasive and non-invasive infections. The ecological insight derived from GPSC38's traits is its adaptability to various hosts and environments, which facilitates its transmission and persistence in different ecological niches. This adaptability, combined with its pathogenic potential, underscores the importance of monitoring and studying this strain to understand its behavior and impact on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pneumoniae
Strainstrain GPSC38

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pneumoniae strain GPSC38
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Cavia
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pneumoniae strain GPSC38 genome assembly, contig:

Gene Summary

Adenine Count

666120 bp

Thymine Count

682140 bp

Guanine Count

432185 bp

Cytosine Count

440721 bp

Genome Length

2221228 bp

Protein-coding Genes

2198 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyoxalase family proteinSAMEA3714202_01931Not AvailablePositive1888056 - 188840312890.5
transposase family proteinSAMEA3714202_01932Not AvailableNegative1888520 - 188902919665.7
degenerate transposaseSAMEA3714202_01933Not AvailableNegative1889061 - 188932710174.2
elongation factor tuSAMEA3714202_01934Not AvailableNegative1889951 - 189114743973.4
glycerol facilitator-aquaporinSAMEA3714202_01935Not AvailableNegative1892069 - 189293830685.6
cell wall surface anchor family proteinSAMEA3714202_01936Not AvailableNegative1893162 - 189378222607.5
putative sortase-sorted surface anchored protein (pseudogene)SAMEA3714202_01937Not AvailableNegative1893740 - 189484641105.9
uncharacterised proteinSAMEA3714202_01938Not AvailableNegative1894957 - 18952119495.2
degenerate transposaseSAMEA3714202_01939Not AvailableNegative1895569 - 189610220681.2
phosphoglucomutaseSAMEA3714202_01940Not AvailablePositive1896648 - 189836662676.0

Displaying genes 4181 – 4190 of 4564 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Community acquired pneumoniaCausesPMC10663590
Bacterial pneumoniaCausesPMC10663590
MeningitisCausesPMC11116026
EncephalitisCausesPMC11116026
SinusitisCausesPMC12375837
MeningitisCausesPMC12680174
PneumoniaCausesPMC12680174
Otitis mediaCausesPMC3695778
Purulent pericarditisCausesPMC3853837
InfectionsCausesPMC4120200

Displaying health effects 1 – 10 of 79 in total