Streptococcus pneumoniae strain GPSC413

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pneumoniae strain GPSC413 is a Gram-positive bacterium characterized by its cocci shape and arrangement in chains or pairs. It is a facultative anaerobe, indicating that it can survive in both oxygen-rich and oxygen-poor environments. This species is non-motile and lacks flagella, which limits its mobility. It has a single replicon and a single membrane, and its optimal growth temperature is 30°C, placing it within the mesophilic temperature range. This strain has been identified in multiple habitats, suggesting a versatile ecological niche. It is free-living but can also exist as a pathogen, particularly in humans, where it is associated with various serious health effects. These include bacteremia, pneumonia, meningitis, and a range of other infections such as sepsis, cellulitis, and otitis media. GPSC413 is particularly known for causing community-acquired pneumonia and invasive pneumococcal disease (IPD). The host range of this strain extends beyond humans to include domestic animals such as chickens (Gallus gallus), guinea pigs (Cavia), and rodents like Meriones unguiculatus and Chinchilla. This broad host spectrum highlights the potential for interspecies transmission and the ecological adaptability of S. pneumoniae. Understanding the pathogenicity of GPSC413 is critical, given its implications for public health, especially in vulnerable populations that may suffer from acute infections and complications associated with this bacterium.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pneumoniae
Strainstrain GPSC413

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pneumoniae strain GPSC413
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Cavia
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pneumoniae strain GPSC413 genome assembly, contig:

Gene Summary

Adenine Count

683693 bp

Thymine Count

683584 bp

Guanine Count

437561 bp

Cytosine Count

455537 bp

Genome Length

2263570 bp

Protein-coding Genes

2115 genes

Non-Coding Genes

195 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integral membrane proteinSAMEA2203388_02329Not AvailableNegative2251552 - 225304252659.0
tetr family transcriptional regulatorSAMEA2203388_02330Not AvailablePositive2253221 - 225376321275.7
Trna-asnNot AvailableNot AvailablePositive2253804 - 2253877Not Available
Trna-gluNot AvailableNot AvailablePositive2253883 - 2253954Not Available
competence-specific global transcription modulatorSAMEA2203388_02333Not AvailablePositive2254530 - 225500919890.6
transposase, issmi3SAMEA2203388_02334Not AvailableNegative2255281 - 225644744357.3
Trna-pseudoNot AvailableNot AvailablePositive2256647 - 2256721Not Available
uncharacterised proteinSAMEA2203388_02335Not AvailableNegative2257086 - 225765223477.3
putative transposaseSAMEA2203388_02336Not AvailablePositive2258013 - 225855820662.9
phage holin, ll-h familySAMEA2203388_02337Not AvailablePositive2260573 - 226085410174.2

Displaying genes 2301 – 2310 of 2310 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Community acquired pneumoniaCausesPMC10663590
Bacterial pneumoniaCausesPMC10663590
MeningitisCausesPMC11116026
EncephalitisCausesPMC11116026
SinusitisCausesPMC12375837
MeningitisCausesPMC12680174
PneumoniaCausesPMC12680174
Otitis mediaCausesPMC3695778
Purulent pericarditisCausesPMC3853837
InfectionsCausesPMC4120200

Displaying health effects 1 – 10 of 79 in total