Streptococcus pneumoniae strain GPSC413

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Description

Streptococcus pneumoniae strain GPSC413 is a Gram-positive bacterium characterized by its cocci shape and arrangement in chains or pairs. It is a facultative anaerobe, indicating that it can survive in both oxygen-rich and oxygen-poor environments. This species is non-motile and lacks flagella, which limits its mobility. It has a single replicon and a single membrane, and its optimal growth temperature is 30°C, placing it within the mesophilic temperature range. This strain has been identified in multiple habitats, suggesting a versatile ecological niche. It is free-living but can also exist as a pathogen, particularly in humans, where it is associated with various serious health effects. These include bacteremia, pneumonia, meningitis, and a range of other infections such as sepsis, cellulitis, and otitis media. GPSC413 is particularly known for causing community-acquired pneumonia and invasive pneumococcal disease (IPD). The host range of this strain extends beyond humans to include domestic animals such as chickens (Gallus gallus), guinea pigs (Cavia), and rodents like Meriones unguiculatus and Chinchilla. This broad host spectrum highlights the potential for interspecies transmission and the ecological adaptability of S. pneumoniae. Understanding the pathogenicity of GPSC413 is critical, given its implications for public health, especially in vulnerable populations that may suffer from acute infections and complications associated with this bacterium.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusStreptococcus
SpeciesStreptococcus pneumoniae
Strainstrain GPSC413

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Streptococcus pneumoniae strain GPSC413
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Cavia
Cell arrangementChains - Pairs
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Streptococcus pneumoniae strain GPSC413 genome assembly, contig:

Gene Summary

Adenine Count

683693 bp

Thymine Count

683584 bp

Guanine Count

437561 bp

Cytosine Count

455537 bp

Genome Length

2263570 bp

Protein-coding Genes

2115 genes

Non-Coding Genes

195 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidine/deoxycytidylate deaminaseSAMEA2203388_02299Not AvailableNegative2219443 - 221991017629.3
uncharacterised proteinSAMEA2203388_02300Not AvailablePositive2220184 - 22203395958.41
dna-binding proteinSAMEA2203388_02301Not AvailablePositive2220481 - 22206606497.79
lytic amidase (n-acetylmuramoyl-l-alanine amidase)SAMEA2203388_02302Not AvailableNegative2220798 - 222111212185.1
branched-chain amino acid aminotransferaseSAMEA2203388_02303Not AvailableNegative2221587 - 22218178464.28
pyroglutamyl-peptidase iSAMEA2203388_02304Not AvailableNegative2221985 - 222262923421.4
permeaseSAMEA2203388_02305Not AvailableNegative2222644 - 222356732777.5
permeaseSAMEA2203388_02306Not AvailableNegative2223564 - 222425324974.9
extracellular oligopeptide-binding proteinSAMEA2203388_02307Not AvailableNegative2224318 - 222502225923.7
branched-chain amino acid aminotransferaseSAMEA2203388_02308Not AvailableNegative2225078 - 222610037475.5

Displaying genes 2271 – 2280 of 2310 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Community acquired pneumoniaCausesPMC10663590
Bacterial pneumoniaCausesPMC10663590
MeningitisCausesPMC11116026
EncephalitisCausesPMC11116026
SinusitisCausesPMC12375837
MeningitisCausesPMC12680174
PneumoniaCausesPMC12680174
Otitis mediaCausesPMC3695778
Purulent pericarditisCausesPMC3853837
InfectionsCausesPMC4120200

Displaying health effects 1 – 10 of 79 in total