Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding/hydrolysing protein | SAMEA1710551_00840 | Not Available | Positive | 888495 - 889082 | 21618.5 |
| beta-lactamase repressor | SAMEA1710551_00841 | Not Available | Positive | 890328 - 890705 | 14749.8 |
| beta-lactamase inducer | SAMEA1710551_00842 | Not Available | Positive | 890710 - 891732 | 39870.3 |
| peptidoglycan-binding/hydrolysing protein | SAMEA1710551_00843 | Not Available | Positive | 891794 - 892396 | 22331.4 |
| alpha-hydroxy acid dehydrogenase,fmn-dependent | SAMEA1710551_00844 | Not Available | Negative | 892530 - 893546 | 36359.3 |
| uncharacterised protein | SAMEA1710551_00845 | Not Available | Negative | 893876 - 894058 | 7009.39 |
| protein of uncharacterised function (duf3785) | SAMEA1710551_00846 | Not Available | Positive | 894374 - 894793 | 16223.2 |
| diguanylate cyclase signaling protein | SAMEA1710551_00847 | Not Available | Positive | 894924 - 896765 | 73200.4 |
| diguanylate cyclase signaling protein | SAMEA1710551_00848 | Not Available | Positive | 896807 - 898678 | 73502.2 |
| sigma-54 interacting regulatory protein | SAMEA1710551_00849 | Not Available | Positive | 898695 - 900686 | 75472.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
