Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-thiocytidine trna biosynthesis protein ttca | SAMEA1710551_00829 | Not Available | Positive | 878859 - 879719 | 33022.3 |
| exonuclease | SAMEA1710551_00830 | Not Available | Positive | 879767 - 880795 | 40559.9 |
| flavoredoxin | SAMEA1710551_00831 | Not Available | Positive | 881159 - 881665 | 19516.2 |
| phosphatidylinositol 4-phosphate 5-kinase | SAMEA1710551_00832 | Not Available | Positive | 882078 - 882746 | 25962.9 |
| dna polymerase iii subunit epsilon | SAMEA1710551_00833 | Not Available | Positive | 882905 - 883411 | 19562.8 |
| glycosyl transferase family protein | SAMEA1710551_00834 | Not Available | Positive | 883539 - 884555 | 38969.2 |
| pp_00815 | SAMEA1710551_00836 | Not Available | Positive | 884911 - 885615 | Not Available |
| membrane protein | SAMEA1710551_00837 | Not Available | Positive | 885907 - 886389 | 17876.7 |
| beta-lactamase repressor | SAMEA1710551_00838 | Not Available | Positive | 887028 - 887402 | 14648.6 |
| beta-lactamase inducer | SAMEA1710551_00839 | Not Available | Positive | 887407 - 888429 | 39826.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
