Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump | SAMEA1710551_00819 | Not Available | Negative | 866513 - 867823 | 50035.1 |
| multidrug efflux pump | SAMEA1710551_00820 | Not Available | Negative | 867845 - 870979 | 113162.0 |
| lipoprotein | SAMEA1710551_00821 | Not Available | Negative | 870983 - 872206 | 44578.2 |
| marr family transcriptional regulator | SAMEA1710551_00822 | Not Available | Positive | 872458 - 872943 | 18314.4 |
| dna topoisomerase type ia | SAMEA1710551_00823 | Not Available | Negative | 873054 - 875282 | 84759.7 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMEA1710551_00824 | Not Available | Positive | 875395 - 875826 | 15816.2 |
| cell wall hydrolase | SAMEA1710551_00825 | Not Available | Positive | 876086 - 877276 | 42043.7 |
| spore coat peptide assembly protein cotjc 2 | SAMEA1710551_00826 | Not Available | Negative | 877514 - 878086 | 21397.6 |
| spore coat peptide assembly protein cotjb 2 | SAMEA1710551_00827 | Not Available | Negative | 878115 - 878381 | 10513.1 |
| spore coat associated protein ja (cotja) | SAMEA1710551_00828 | Not Available | Negative | 878381 - 878590 | 8138.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
