Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | SAMEA1710551_00685 | Not Available | Negative | 721513 - 722688 | 42463.4 |
| aminotransferase, alanine--glyoxylate transaminase | SAMEA1710551_00686 | Not Available | Positive | 723123 - 723323 | 7566.21 |
| membrane protein | SAMEA1710551_00687 | Not Available | Positive | 723346 - 723870 | 18919.2 |
| arac family transcriptional regulator | SAMEA1710551_00688 | Not Available | Positive | 723970 - 724788 | 32147.0 |
| uncharacterised protein | SAMEA1710551_00689 | Not Available | Positive | 724866 - 725177 | 12285.8 |
| uncharacterised protein | SAMEA1710551_00690 | Not Available | Negative | 725354 - 726019 | 25996.1 |
| tetr family transcriptional regulator | SAMEA1710551_00691 | Not Available | Negative | 726130 - 726771 | 24797.8 |
| 1,4-alpha-glucan-branching protein | SAMEA1710551_00692 | Not Available | Negative | 726945 - 728948 | 77336.1 |
| recombination regulator recx | SAMEA1710551_00693 | Not Available | Negative | 729101 - 729739 | 25096.1 |
| nicotinic acid mononucleotide adenylyltransferase | SAMEA1710551_00694 | Not Available | Positive | 730015 - 730704 | 26693.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
