Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate-lyase 2-activating enzyme | SAMEA1710551_00624 | Not Available | Negative | 651918 - 652820 | 34434.8 |
| formate acetyltransferase (pyruvate formate-lyase) | SAMEA1710551_00625 | Not Available | Negative | 652835 - 655207 | 88836.7 |
| lipoprotein | SAMEA1710551_00626 | Not Available | Negative | 655428 - 656117 | 26037.1 |
| sensor histidine kinase virs | SAMEA1710551_00627 | Not Available | Negative | 656358 - 657737 | 53974.5 |
| two-component response regulator virr-like | SAMEA1710551_00628 | Not Available | Negative | 657731 - 658444 | 28304.6 |
| protein of uncharacterised function (duf2812) | SAMEA1710551_00629 | Not Available | Negative | 658691 - 659242 | 22194.2 |
| zinc transporter zupt | SAMEA1710551_00630 | Not Available | Negative | 659347 - 660150 | 28909.1 |
| peptidase | SAMEA1710551_00631 | Not Available | Negative | 660301 - 661464 | 41824.2 |
| membrane protein | SAMEA1710551_00632 | Not Available | Negative | 661524 - 662711 | 42236.3 |
| abc transporter multidrug-family atp-binding/permease | SAMEA1710551_00633 | Not Available | Negative | 663074 - 664774 | 64563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
