Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | SAMEA1710551_00563 | Not Available | Positive | 592889 - 594169 | 49193.4 |
| fad-linked oxidase | SAMEA1710551_00564 | Not Available | Negative | 594432 - 595823 | 51437.1 |
| electron transfer flavoprotein subunit alpha | SAMEA1710551_00565 | Not Available | Negative | 595834 - 597054 | 44941.8 |
| electron transfer flavoprotein subunit alpha | SAMEA1710551_00566 | Not Available | Negative | 597068 - 597856 | 29008.9 |
| uronate isomerase | SAMEA1710551_00567 | Not Available | Negative | 597873 - 599147 | 47051.0 |
| gntr family transcriptional regulator | SAMEA1710551_00568 | Not Available | Negative | 599265 - 599978 | 27315.2 |
| membrane protein | SAMEA1710551_00569 | Not Available | Positive | 600103 - 601362 | 46099.5 |
| integrase/recombinase | SAMEA1710551_00570 | Not Available | Positive | 601629 - 602195 | 21902.7 |
| homoserine dehydrogenase | SAMEA1710551_00571 | Not Available | Negative | 602394 - 603599 | 44205.9 |
| ribosome-associated protein | SAMEA1710551_00573 | Not Available | Negative | 603900 - 604268 | 13688.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
