Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell surface protein | SAMEA1710551_00503 | Not Available | Negative | 534182 - 535627 | 53069.2 |
| uncharacterised protein | SAMEA1710551_00504 | Not Available | Negative | 535667 - 536479 | 31122.7 |
| site-specific recombinase | SAMEA1710551_00505 | Not Available | Positive | 536661 - 538175 | 58387.3 |
| flia/whig family rna polymerase sigma 28 subunit | SAMEA1710551_00506 | Not Available | Positive | 538201 - 538485 | 11002.4 |
| peptidoglycan glycosyltransferase | SAMEA1710551_00507 | Not Available | Negative | 538583 - 540247 | 62745.8 |
| u32 family peptidase | SAMEA1710551_00508 | Not Available | Negative | 540319 - 541566 | 47698.2 |
| o-methyltransferase | SAMEA1710551_00509 | Not Available | Negative | 541553 - 542227 | 25363.9 |
| aminodeoxychorismate lyase | SAMEA1710551_00510 | Not Available | Negative | 542399 - 543478 | 41036.7 |
| pyrimidine-nucleoside phosphorylase | SAMEA1710551_00511 | Not Available | Negative | 543691 - 545016 | 48226.3 |
| purine nucleoside phosphorylase | SAMEA1710551_00512 | Not Available | Negative | 545219 - 546031 | 29358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
