Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Site-specific recombinase, phage integrase family | SAMEA1710551_03393 | Not Available | Positive | 3686832 - 3687335 | 19508.8 |
| Hypothetical protein | SAMEA1710551_03394 | Not Available | Positive | 3687533 - 3687823 | 11326.8 |
| Hnh endonuclease | SAMEA1710551_03395 | Not Available | Positive | 3687823 - 3688116 | 11019.4 |
| Hypothetical protein | SAMEA1710551_03396 | Not Available | Positive | 3688344 - 3688604 | 10268.6 |
| Terminase large subunit | SAMEA1710551_03397 | Not Available | Positive | 3688601 - 3690250 | 64123.9 |
| Phage portal protein | SAMEA1710551_03398 | Not Available | Positive | 3690266 - 3691420 | 43957.6 |
| Atp-dependent clp protease | SAMEA1710551_03399 | Not Available | Positive | 3691426 - 3692163 | 27761.9 |
| Phage capsid family protein | SAMEA1710551_03400 | Not Available | Positive | 3692156 - 3693424 | 47021.9 |
| Head-tail connector | SAMEA1710551_03401 | Not Available | Positive | 3693434 - 3693721 | 11137.1 |
| Putative phage head-tail adaptor | SAMEA1710551_03402 | Not Available | Positive | 3693723 - 3694061 | 13413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
