Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional p-protein, chorismate mutase/prephenate dehydratase | SAMEA1710551_00308 | Not Available | Negative | 331681 - 332877 | 46318.8 |
| chorismate synthase | SAMEA1710551_00309 | Not Available | Negative | 332880 - 333959 | 39206.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMEA1710551_00310 | Not Available | Negative | 333937 - 335250 | 48668.8 |
| 3-dehydroquinate synthase | SAMEA1710551_00311 | Not Available | Negative | 335250 - 336314 | 40069.9 |
| 3-deoxy-7-phosphoheptulonate synthase | SAMEA1710551_00312 | Not Available | Negative | 336336 - 337349 | 36731.7 |
| cation (mg2+ and co2+) transport-related, membrane protein | SAMEA1710551_00313 | Not Available | Negative | 337811 - 338767 | 37357.8 |
| two-component response regulator kdpe | SAMEA1710551_00314 | Not Available | Negative | 339124 - 339822 | 26423.1 |
| two-component sensor histidine kinase kdpd | SAMEA1710551_00315 | Not Available | Negative | 339856 - 342558 | 101596.0 |
| cell division protease ftsh1 | SAMEA1710551_00316 | Not Available | Negative | 342736 - 344553 | 66334.2 |
| marr family transcriptional regulator | SAMEA1710551_00317 | Not Available | Negative | 344583 - 345026 | 17059.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
