Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase, type 11 family | SAMEA1710551_00298 | Not Available | Negative | 315284 - 316021 | 28271.8 |
| abc transporter substrate-binding protein | SAMEA1710551_00299 | Not Available | Positive | 316400 - 317449 | 38355.7 |
| cupin | SAMEA1710551_00300 | Not Available | Negative | 317598 - 317945 | 12831.1 |
| cell surface protein | SAMEA1710551_00301 | Not Available | Negative | 318400 - 322566 | 146999.0 |
| gdmh | SAMEA1710551_00302 | Not Available | Negative | 323446 - 324192 | 28780.6 |
| two-component sensor histidine kinase | SAMEA1710551_00303 | Not Available | Negative | 324209 - 327646 | 131841.0 |
| two-component response regulator | SAMEA1710551_00304 | Not Available | Negative | 327679 - 329058 | 53090.7 |
| prephenate dehydrogenase | SAMEA1710551_00305 | Not Available | Negative | 329427 - 330266 | 31604.4 |
| shikimate kinase (sk) | SAMEA1710551_00306 | Not Available | Negative | 330287 - 330820 | 20275.7 |
| shikimate dehydrogenase 1 | SAMEA1710551_00307 | Not Available | Negative | 330832 - 331641 | 29984.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
