Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein signal peptidase | SAMEA1710551_00288 | Not Available | Negative | 307876 - 308412 | 20338.4 |
| transcriptional regulator | SAMEA1710551_00289 | Not Available | Negative | 308803 - 309312 | 19189.0 |
| uncharacterised protein | SAMEA1710551_00290 | Not Available | Positive | 310356 - 310490 | 5004.26 |
| phage-related deoxycytidylate deaminase | SAMEA1710551_00291 | Not Available | Positive | 310725 - 311162 | 16576.8 |
| cell wall hydrolase (endolysin) | SAMEA1710551_00292 | Not Available | Positive | 311301 - 312089 | 28591.2 |
| uncharacterised protein | SAMEA1710551_00293 | Not Available | Positive | 312137 - 312595 | 18130.5 |
| lipoprotein | SAMEA1710551_00294 | Not Available | Negative | 312695 - 313045 | 12877.0 |
| ytxh-like protein | SAMEA1710551_00295 | Not Available | Negative | 313047 - 313430 | 13983.0 |
| plasmid-related protein | SAMEA1710551_00296 | Not Available | Negative | 313936 - 314319 | 14376.5 |
| oligonucleotide binding regulator | SAMEA1710551_00297 | Not Available | Positive | 314668 - 315159 | 18987.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
