Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | SAMEA1710551_03684 | Not Available | Positive | 3965411 - 3966229 | 31293.2 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nife | SAMEA1710551_03685 | Not Available | Negative | 3966531 - 3967475 | 35920.9 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nife | SAMEA1710551_03686 | Not Available | Negative | 3967477 - 3968754 | 48701.3 |
| iron compound abc transporter atp-binding protein fhuc | SAMEA1710551_03687 | Not Available | Negative | 3968853 - 3969647 | 30140.3 |
| iron compound abc transporter permease fhug | SAMEA1710551_03688 | Not Available | Negative | 3969647 - 3970627 | 34961.4 |
| iron (iii) dicitrate-binding periplasmic protein | SAMEA1710551_03689 | Not Available | Negative | 3970644 - 3971534 | 32712.9 |
| nitrogenase iron protein nifh | SAMEA1710551_03690 | Not Available | Negative | 3971576 - 3972325 | 27326.0 |
| arac family transcriptional regulator | SAMEA1710551_03691 | Not Available | Positive | 3972474 - 3973214 | 28773.6 |
| sodium:phosphate symporter | SAMEA1710551_03692 | Not Available | Positive | 3973523 - 3975142 | 58929.4 |
| uncharacterised protein | SAMEA1710551_03693 | Not Available | Positive | 3975514 - 3975708 | 7813.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
