Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent dehydrogenase | SAMEA1710551_03653 | Not Available | Positive | 3927576 - 3928364 | 28011.6 |
| dna-directed rna polymerase subunit beta | SAMEA1710551_03654 | Not Available | Positive | 3928837 - 3932553 | 139349.0 |
| dna-directed rna polymerase subunit beta' | SAMEA1710551_03655 | Not Available | Positive | 3932595 - 3936080 | 129753.0 |
| 30s ribosomal protein s12 | SAMEA1710551_03656 | Not Available | Positive | 3936370 - 3936792 | 15436.9 |
| 30s ribosomal protein s7 | SAMEA1710551_03657 | Not Available | Positive | 3936915 - 3937385 | 17672.7 |
| elongation factor g | SAMEA1710551_03658 | Not Available | Positive | 3937434 - 3939500 | 75886.8 |
| sigma-54 dependent transcriptional regulator | SAMEA1710551_03659 | Not Available | Negative | 3939704 - 3940351 | 24999.8 |
| membrane protein | SAMEA1710551_03660 | Not Available | Positive | 3940584 - 3940985 | 15123.9 |
| copper-sensing transcriptional repressor csor | SAMEA1710551_03661 | Not Available | Positive | 3941028 - 3941321 | 11207.8 |
| regulator of the sigma(e) factor | SAMEA1710551_03662 | Not Available | Positive | 3941336 - 3941776 | 15926.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
