Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase nad-dependent | SAMEA1710551_03622 | Not Available | Negative | 3896415 - 3897410 | 36185.7 |
| aconitate hydratase | SAMEA1710551_03623 | Not Available | Negative | 3897432 - 3899357 | 69265.0 |
| trans-homoaconitate synthase | SAMEA1710551_03624 | Not Available | Negative | 3899382 - 3900575 | 43845.6 |
| atp-dependent rna helicase | SAMEA1710551_03625 | Not Available | Positive | 3901038 - 3902147 | 41690.8 |
| uncharacterised protein | SAMEA1710551_03626 | Not Available | Negative | 3902370 - 3902759 | 15351.7 |
| membrane protein | SAMEA1710551_03627 | Not Available | Negative | 3902935 - 3904125 | 43698.6 |
| metallo-beta-lactamase superfamily protein | SAMEA1710551_03628 | Not Available | Negative | 3904726 - 3905286 | 20795.4 |
| integrase tn916-like, ctn1-orf1 | SAMEA1710551_03629 | Not Available | Negative | 3905682 - 3906899 | 47024.5 |
| excisionase | SAMEA1710551_03630 | Not Available | Negative | 3906981 - 3907184 | 8110.85 |
| conjugative transposon protein | SAMEA1710551_03631 | Not Available | Negative | 3907645 - 3907875 | 8944.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
