Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | SAMEA1710551_03602 | Not Available | Negative | 3879589 - 3880611 | 38858.0 |
| cobalamin-binding protein | SAMEA1710551_03603 | Not Available | Negative | 3880612 - 3881250 | 23240.5 |
| acetyltransferase | SAMEA1710551_03604 | Not Available | Negative | 3881377 - 3882528 | 45158.3 |
| atp-binding protein | SAMEA1710551_03605 | Not Available | Positive | 3882950 - 3883762 | 29473.9 |
| uncharacterised protein | SAMEA1710551_03606 | Not Available | Negative | 3883850 - 3884041 | 7782.43 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nife | SAMEA1710551_03607 | Not Available | Negative | 3884273 - 3884530 | 9753.72 |
| uncharacterised protein | SAMEA1710551_03608 | Not Available | Negative | 3884818 - 3885066 | 9516.46 |
| uncharacterised protein | SAMEA1710551_03609 | Not Available | Negative | 3885089 - 3885523 | 17031.1 |
| uncharacterised protein | SAMEA1710551_03610 | Not Available | Negative | 3885783 - 3886703 | 35643.9 |
| nuclease | SAMEA1710551_03611 | Not Available | Positive | 3886990 - 3887343 | 14071.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
