Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter cobalt-specific permease | SAMEA1710551_03581 | Not Available | Positive | 3859058 - 3859861 | 30431.7 |
| trna pseudouridine synthase a 1 | SAMEA1710551_03582 | Not Available | Positive | 3859894 - 3860625 | 27374.0 |
| 50s ribosomal protein l13 | SAMEA1710551_03583 | Not Available | Positive | 3860745 - 3861176 | 16203.8 |
| 30s ribosomal protein s9 | SAMEA1710551_03584 | Not Available | Positive | 3861205 - 3861597 | 14553.7 |
| germination-specific n-acetylmuramoyl-l-alanine amidase | SAMEA1710551_03585 | Not Available | Positive | 3862058 - 3862810 | 28810.6 |
| ecsc protein | SAMEA1710551_03586 | Not Available | Negative | 3863212 - 3863781 | 21834.7 |
| adenosine deaminase | SAMEA1710551_03587 | Not Available | Negative | 3863853 - 3864842 | 37371.1 |
| sodium/glutamate symporter | SAMEA1710551_03588 | Not Available | Positive | 3865102 - 3866355 | 46014.1 |
| ferrous iron transport protein | SAMEA1710551_03589 | Not Available | Positive | 3866452 - 3866676 | 8248.31 |
| uncharacterised protein | SAMEA1710551_03590 | Not Available | Negative | 3867132 - 3867323 | 7068.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
