Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein | SAMEA1710551_03571 | Not Available | Positive | 3853583 - 3853852 | 10244.7 |
| translation initiation factor if-1 | SAMEA1710551_03572 | Not Available | Positive | 3853890 - 3854108 | 8282.25 |
| 50s ribosomal protein l36 | SAMEA1710551_03573 | Not Available | Positive | 3854144 - 3854257 | 4277.6 |
| 30s ribosomal protein s13 | SAMEA1710551_03574 | Not Available | Positive | 3854410 - 3854781 | 14093.3 |
| 30s ribosomal protein s11 | SAMEA1710551_03575 | Not Available | Positive | 3854817 - 3855215 | 14438.6 |
| 30s ribosomal protein s4 | SAMEA1710551_03576 | Not Available | Positive | 3855247 - 3855870 | 23567.7 |
| dna-directed rna polymerase subunit alpha | SAMEA1710551_03577 | Not Available | Positive | 3855948 - 3856895 | 34912.0 |
| 50s ribosomal protein l17 | SAMEA1710551_03578 | Not Available | Positive | 3856916 - 3857257 | 12966.1 |
| abc transporter cobalt-specific atp-binding protein | SAMEA1710551_03579 | Not Available | Positive | 3857377 - 3858210 | 31008.0 |
| cobalt transporter atp-binding subunit | SAMEA1710551_03580 | Not Available | Positive | 3858198 - 3859064 | 32057.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
