Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA1710551_00256 | Not Available | Positive | 262372 - 263523 | 45259.9 |
| snf2-like protein | SAMEA1710551_00257 | Not Available | Negative | 263915 - 271594 | 291614.0 |
| dna repair protein | SAMEA1710551_00258 | Not Available | Negative | 271612 - 272253 | 24076.1 |
| uncharacterised protein | SAMEA1710551_00259 | Not Available | Negative | 272374 - 272685 | 12003.3 |
| transcriptional regulator | SAMEA1710551_00260 | Not Available | Negative | 272752 - 273840 | 40815.7 |
| collagen adhesin | SAMEA1710551_00261 | Not Available | Negative | 274066 - 280434 | 231924.0 |
| dna topoisomerase iii | SAMEA1710551_00262 | Not Available | Negative | 280500 - 282572 | 78659.0 |
| adenine-specific dna-methyltransferase | SAMEA1710551_00263 | Not Available | Negative | 282574 - 283134 | 21448.8 |
| cell surface protein | SAMEA1710551_00264 | Not Available | Negative | 283153 - 284532 | 50490.1 |
| uncharacterised protein | SAMEA1710551_00265 | Not Available | Negative | 284471 - 284791 | 12205.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
