Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent peptidase, m41 family | SAMEA1710551_03511 | Not Available | Positive | 3799813 - 3801216 | 52316.8 |
| rna polymerase sigma factor | SAMEA1710551_03512 | Not Available | Positive | 3801745 - 3802224 | 18692.6 |
| uncharacterised protein | SAMEA1710551_03513 | Not Available | Positive | 3802221 - 3803000 | 28983.1 |
| acetyltransferase | SAMEA1710551_03514 | Not Available | Negative | 3803241 - 3803741 | 19312.5 |
| methyltransferase | SAMEA1710551_03515 | Not Available | Negative | 3804321 - 3805028 | 27293.6 |
| uncharacterised protein | SAMEA1710551_03516 | Not Available | Positive | 3805151 - 3805543 | 14798.8 |
| uncharacterized protein conserved in bacteria | SAMEA1710551_03517 | Not Available | Negative | 3805942 - 3806811 | 33177.9 |
| glyoxalase | SAMEA1710551_03518 | Not Available | Negative | 3807081 - 3807551 | 18541.1 |
| beta-lactams repressor | SAMEA1710551_03519 | Not Available | Negative | 3808045 - 3808434 | 15460.9 |
| two-component sensor histidine kinase | SAMEA1710551_03520 | Not Available | Negative | 3809517 - 3810923 | 53090.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
