Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter permease | SAMEA1710551_03460 | Not Available | Positive | 3747137 - 3748123 | 37123.3 |
| oligopeptide abc transporter permease | SAMEA1710551_03461 | Not Available | Positive | 3748107 - 3749018 | 33604.6 |
| abc transporter oligopeptide-family extracellular solute-binding protein | SAMEA1710551_03462 | Not Available | Positive | 3749131 - 3750699 | 58583.7 |
| abc transporter atp-binding protein | SAMEA1710551_03463 | Not Available | Positive | 3750786 - 3751799 | 37357.5 |
| oligopeptide abc transporter atp-binding protein | SAMEA1710551_03464 | Not Available | Positive | 3751792 - 3752736 | 35647.8 |
| sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr | SAMEA1710551_03465 | Not Available | Positive | 3753096 - 3755753 | 101292.0 |
| recombination factor protein rara | SAMEA1710551_03466 | Not Available | Positive | 3755967 - 3756596 | 24552.3 |
| pts system lactose/cellobiose-family transporter subunit iib | SAMEA1710551_03467 | Not Available | Positive | 3756714 - 3757040 | 12113.7 |
| pts system lactose/cellobiose-family transporter subunit iic | SAMEA1710551_03468 | Not Available | Positive | 3757056 - 3758345 | 46941.1 |
| pts system lactose/cellobiose-family transporter subunit iia | SAMEA1710551_03469 | Not Available | Positive | 3758369 - 3758698 | 12222.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
