Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp--glucose-1-phosphate uridylyltransferase | SAMEA1710551_03448 | Not Available | Negative | 3736619 - 3737494 | 32949.0 |
| uncharacterised protein | SAMEA1710551_03449 | Not Available | Negative | 3737686 - 3738006 | 12284.6 |
| uncharacterised protein | SAMEA1710551_03450 | Not Available | Negative | 3737996 - 3739987 | 78188.7 |
| sporulation protein | SAMEA1710551_03451 | Not Available | Negative | 3740108 - 3742633 | 97704.8 |
| peptidase c60b, sortase b | SAMEA1710551_03454 | Not Available | Positive | 3743386 - 3744063 | 26765.8 |
| Trna-thr | Not Available | Not Available | Positive | 3744211 - 3744285 | Not Available |
| glutamate carboxypeptidase | SAMEA1710551_03456 | Not Available | Positive | 3744679 - 3745392 | 26174.2 |
| nifu-like protein | SAMEA1710551_03457 | Not Available | Positive | 3745427 - 3745651 | 7885.76 |
| membrane protein | SAMEA1710551_03458 | Not Available | Negative | 3745974 - 3746372 | 15206.1 |
| marr family transcriptional regulator | SAMEA1710551_03459 | Not Available | Negative | 3746375 - 3746809 | 16854.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
