Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | strain 078GUE004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile strain 078GUE004 genome assembly, contig:
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease relaxase | SAMEA1710551_00236 | Not Available | Negative | 235330 - 236955 | 61796.4 |
| permease | SAMEA1710551_00237 | Not Available | Positive | 237746 - 238966 | 43826.0 |
| conjugative transfer protein tn1549-like, ctn4-orf4 | SAMEA1710551_00238 | Not Available | Negative | 239491 - 240207 | 27003.3 |
| phage-like protein | SAMEA1710551_00239 | Not Available | Negative | 240781 - 242130 | 52576.4 |
| uncharacterised protein | SAMEA1710551_00240 | Not Available | Positive | 242219 - 242731 | 19110.5 |
| dna strand transferase | SAMEA1710551_00241 | Not Available | Negative | 242749 - 244344 | 60971.7 |
| conjugative transposon site-specific recombinase | SAMEA1710551_00242 | Not Available | Negative | 244995 - 246617 | 62628.3 |
| plasmid recombination-like protein | SAMEA1710551_00243 | Not Available | Negative | 246985 - 247929 | 36343.7 |
| conjugative transposon protein | SAMEA1710551_00244 | Not Available | Negative | 248621 - 249034 | 15607.8 |
| putative transcriptional regulator | SAMEA1710551_00245 | Not Available | Positive | 249349 - 250149 | 29185.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe diarrhea | Causes | PMC10881109 |
| Colitis | Causes | PMC12366080 |
| Colitis | Causes | PMC5288394 |
| Diarrhea | Causes | PMC10169446 |
| Persistent infection | Causes | PMC11306097 |
| Cdi | Causes | PMC11354687 |
| Healthcare-associated colitis | Causes | PMC11355982 |
| Pseudomembranous colitis | Causes | PMC11355982 |
| Toxic megacolon | Causes | PMC11355982 |
| Enterocolitis | Causes | PMC11355982 |
